| Medium.ExtraPropertyFlowRate | J_S | | Dissolved substance diffusion rate |
| Medium.ExtraProperty | C_S_film | | Film dissolved substance concentration |
| Medium.ExtraPropertyFlowRate | J_X | | Particulate substance diffusion rate |
| Medium.ExtraProperty | C_X_film | | Film particulate substance concentration |
| Real | heterotrophDominance | | Dominance of heterotrophic bacteria. 1 = No autotrophs, 0 = no heterotrophs |
| Real | K_d | | Variable detachment coefficient |
| Real | filmPorosity | | Variable biofilm porosity |
| Types.ProcessData.ProcessMatrix | bioparam | | |
| SI.Thickness | L | | |
| Real | nitrificationRate_Apparent | -R_S[6]/A | |
| Real | nitrificationRate_AO | -(P_film[4])*bioparam.SoluteReactions[S.NH, 4]*L | |
| Real | nitrificationRate_NO | -(P_film[5])*bioparam.SoluteReactions[S.NO2, 5]*L | |
| Real | denitrificationRate | -L*sum(P_film[2:3]*bioparam.SoluteReactions[S.NO2:S.NO3, 2:3]) | |
| Real | R_S | Vf*reactionRate_S + reactionRate_S_film*L*A | Generation/consumption of species |
| Real | R_X | Vf*reactionRate_X + reactionRate_X_film*L*A | Generation/consumption of species |
| Real | r_S_total | R_S/V | Generation/consumption of species per unit reactor volume |
| Real | r_X_total | R_X/V | Generation/consumption of species per unit reactor volume |
| Real | r_S_film | reactionRate_S_film*L | Generation/consumption of species per unit biofilm area |
| Real | r_X_film | reactionRate_X_film*L | Generation/consumption of species per unit biofilm area |
| Real | R_S_film | {P_film.*bioparam.SoluteReactions[i, :] for i in S}*L | Generation/consumption of species per unit biofilm area from each process |