modelBasicNode
Basic declarations of any Metabolite
Extends from ADGenKinetics.Derivatives.Interfaces.dynamic.NodeConnections (Metabolite connections to reactions wuth one connector only), ADGenKinetics.NodeElements.dynamic.BasicNode (Basic declarations of any Metabolite).
Parameters
| Type | Name | Default | Description |
|---|---|---|---|
| Units.Concentration | c_0 (from BasicNode) | 0 | initial concentration |
| Integer | NG | # of gradients | |
| Real[NG] | g_c_0 | zeros(NG) | gradients of c_0 |
Connectors
| Type | Name | Default | Description |
|---|---|---|---|
| ADGenKinetics.Derivatives.Interfaces.ChemicalPort | rc (from NodeConnections) | connection to any reaction | |
| ADGenKinetics.Derivatives.Interfaces.ModifierChemicalPort | mc (from NodeConnections) | Connection to a modifier |
Components
| Type | Name | Default | Description |
|---|---|---|---|
| Units.Concentration | c (from BasicNode) | substance concentration | |
| Units.VolumetricReactionRate | r_net (from BasicNode) | net reaction rate | |
| Real[NG] | g_c | gradients of c | |
| Real[NG] | g_r_net | gradients of r_net |