modelNucleus

Nucleus
Diagram of NucleusOpen the diagram
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Extends from BioChem.Compartments.Compartment (Default compartment (constant volume)).

Parameters

TypeNameDefaultDescription
Realk3t
Realk3d
Realk6t
Realk6d
Realk6a
Realk7a
Realk7d

Connectors

TypeNameDefaultDescription
BioChem.Interfaces.Nodes.SubstanceConnectory3_node
BioChem.Interfaces.Nodes.SubstanceConnectory2_node
BioChem.Interfaces.Nodes.SubstanceConnectory6_node
BioChem.Interfaces.Nodes.SubstanceConnectory5_node

Components

TypeNameDefaultDescription
BioChem.Units.VolumeV (from Compartment)Compartment volume
RealNucleus_VVVariable used to make the compartment volume accessible for inner components. Do not edit.
BioChem.Examples.CircadianOscillator.Nucleus.y3_y3PER2_CRY_complex_nucleus
BioChem.Examples.CircadianOscillator.Nucleus.y6_y6BMAL1_nucleus
BioChem.Examples.CircadianOscillator.Nucleus.y7_y7Active BMAL1
BioChem.Examples.CircadianOscillator.Nucleus.per2_cry_nuclear_export_per2_cry_nuclear_exportper2_cry_nuclear_export
BioChem.Substances.AmbientSubstanceambientSubstance
BioChem.Examples.CircadianOscillator.Nucleus.nuclear_per2_cry_complex_degradation_nuclear_per2_cry_complex_degradationnuclear_per2_cry_complex_degradation
Nucleus.BMAL1_nuclear_export_BMAL1_nuclear_exportBMAL1_nuclear_export
BioChem.Examples.CircadianOscillator.Nucleus.nuclear_BMAL1_degradation_nuclear_BMAL1_degradationnuclear_BMAL1_degradation
Nucleus.BMAL1_activation_BMAL1_activationBMAL1_activation
Nucleus.BMAL1_deactivation_BMAL1_deactivationBMAL1_deactivation
BioChem.Examples.CircadianOscillator.Nucleus.Active_BMAL1_degradation_Active_BMAL1_degradationActive_BMAL1_degradation

Contents

NameDescription
y3_
y6_
y7_
per2_cry_nuclear_export_
nuclear_per2_cry_complex_degradation_
BMAL1_nuclear_export_
nuclear_BMAL1_degradation_
BMAL1_activation_
BMAL1_deactivation_
Active_BMAL1_degradation_