modelGlycolysis

Glycolysis

Extends from BioChem.Compartments.Compartment (Default compartment (constant volume)).

Information

Glycolysis

A simple glycolysis model. The parameter values in this model are arbitrarily chosen, to obtain a fully functional model, realistic parameter values must be used.

Connectors

TypeNameDefaultDescription
BioChem.Interfaces.Nodes.SubstanceConnectorsGlucose
Interfaces.Nodes.SubstanceConnectorsPyruvate
Interfaces.Nodes.SubstanceConnectorsPyruvate4

Components

TypeNameDefaultDescription
BioChem.Units.VolumeV (from Compartment)Compartment volume
Reactions.MassAction.Irreversible.UniUni.Uuiuui1
Substances.SubstancePEP1Phosphoenol pyruvate
Reactions.MassAction.Irreversible.UniUni.Uuiuui4
Reactions.MassAction.Reversible.UniUni.Uuruur2
Substances.SubstanceG13BPGlycerate-1,3-bisphosphate
Reactions.MassAction.Reversible.UniUni.Uuruur
Reactions.MassAction.Reversible.UniUni.Uuruur1
Reactions.MassAction.Irreversible.UniBi.Ubiubi
Reactions.MassAction.Irreversible.UniUni.Uuiuui3
Substances.SubstanceG2P1Glycerate-2-phosphate
Reactions.MassAction.Irreversible.UniUni.Uuiuui2
Substances.SubstanceGA3PGlycerate-3-phosphate
Reactions.MassAction.Irreversible.UniUni.Uuiuui5
Reactions.MassAction.Irreversible.UniUni.Uuiuui
Substances.SubstancePyruvate
Substances.SubstanceGlucoseGlucose
Substances.SubstanceG6PGlucose-6-phosphate
Substances.SubstanceF6PFructose-6-phosphate
Substances.SubstanceF16BPFructose-1,6-bisphosphate
Substances.SubstanceG3PGlyceraldehyde-3-phosphate
Substances.SubstanceDHAPDihydroxyacetone phosphate