.BioChem.Interfaces.Reactions

Partial models, extended by models in the subpackage Reactions

Information

Reactions

This package contains partial reaction models that can be used as templates when composing new reactions. In fact all reactions found in the Reactions are based on these partial reaction models. All reactions need at least one substrate and at least one product. This package contains base classes for any combination of substrates and products for reversible as well as irreversible reactions, as illustrated in Figure 1. The first letter in the reaction name indicates the number of substrates, and the second the number of products. Finally, the third letter indicates if the reaction is reversible (r) or irreversible (i). All these information is also illustrated by the icon.

Fig1:Reactions
Figure 1: Some of the reactions

Contents

NameDescription
ModifiersPartial models of modifiers to reactions
BasicsBasic properties of reactions
UurUni-Uni reversible reaction
UuiUni-Uni irreversible reaction
UtrUni-Tri reversible reaction
UtiUni-Tri irreversible reaction
UbrUni-Bi reversible reaction
UbiUni-Bi irreversible reaction
TurTri-Uni reversible reaction
TuiTri-Uni irreversible reaction
TtrTri-Tri reversible reaction
TtiTri-Tri irreversible reaction
TbrTri-Bi reversible reaction
TbiTri-Bi irreversible reaction
BurBi-Uni reversible reaction
BuiBi-Uni irreversible reaction
BtrBi-Tri reversible reaction
BtiBi-Tri irreversible reaction
BbrBi-Bi reversible reaction
BbiBi-Bi irreversible reaction
QbiQuad-Bi irreversible reaction
QbrQuad-Bi reversible reaction
QtiQuad-Tri irreversible reaction
QtrQuad-Tri reversible reaction
QuiQuad-Uni irreversible reaction
QurQuad-Uni reversible reaction
QqiQuad-Quad irreversible reaction
QqrQuad-Quad reversible reaction
Uqr
UqiUni-Quad irreversible reaction
BqiBi-Quad irreversible reaction
BqrBi-Quad reversible reaction
TqrTri-Quad reversible reaction
TqiTri-Quad irreversible reaction
MmiMulti-Multi irreversible reaction
BmiBi-Multi irreversible reaction
QmiQuad-Multi irreversible reaction
TmiTri-Multi irreversible reaction
UmiUni-Multi irreversible reaction
MqiMulti-Quad irreversible reaction
MtiMulti-Tri irreversible reaction
MbiMulti-Bi irreversible reaction
MuiMulti-Uni irreversible reaction
MbrMulti-Bi reversible reaction
MmrMulti-Multi reversible reaction
MqrMulti-Quad reversible reaction
MtrMulti-Tri reversible reaction
MurMulti-Uni reversible reaction
UmrUni-Multi reversible reaction
BmrBi-Multi reversible reaction
QmrQuad-Multi reversible reaction
TmrTri-Multi reversible reaction

Generated at 2025-12-10T19:14:03Z by OpenModelicaOpenModelica 1.25.7 using GenerateDoc.mos