.BioChem.Interfaces.Reactions

Information

Reactions

This package contains partial reaction models that can be used as templates when composing new reactions. In fact all reactions found in the Reactions are based on these partial reaction models. All reactions need at least one substrate and at least one product. This package contains base classes for any combination of substrates and products for reversible as well as irreversible reactions, as illustrated in Figure 1. The first letter in the reaction name indicates the number of substrates, and the second the number of products. Finally, the third letter indicates if the reaction is reversible (r) or irreversible (i). All these information is also illustrated by the icon.

Fig1:Reactions
Figure 1: Some of the reactions

Contents

Name Description
 Modifiers Partial models of modifiers to reactions
 Basics Basic properties of reactions
 Uur Uni-Uni reversible reaction
 Uui Uni-Uni irreversible reaction
 Utr Uni-Tri reversible reaction
 Uti Uni-Tri irreversible reaction
 Ubr Uni-Bi reversible reaction
 Ubi Uni-Bi irreversible reaction
 Tur Tri-Uni reversible reaction
 Tui Tri-Uni irreversible reaction
 Ttr Tri-Tri reversible reaction
 Tti Tri-Tri irreversible reaction
 Tbr Tri-Bi reversible reaction
 Tbi Tri-Bi irreversible reaction
 Bur Bi-Uni reversible reaction
 Bui Bi-Uni irreversible reaction
 Btr Bi-Tri reversible reaction
 Bti Bi-Tri irreversible reaction
 Bbr Bi-Bi reversible reaction
 Bbi Bi-Bi irreversible reaction
 Qbi Quad-Bi irreversible reaction
 Qbr Quad-Bi reversible reaction
 Qti Quad-Tri irreversible reaction
 Qtr Quad-Tri reversible reaction
 Qui Quad-Uni irreversible reaction
 Qur Quad-Uni reversible reaction
 Qqi Quad-Quad irreversible reaction
 Qqr Quad-Quad reversible reaction
 Uqr
 Uqi Uni-Quad irreversible reaction
 Bqi Bi-Quad irreversible reaction
 Bqr Bi-Quad reversible reaction
 Tqr Tri-Quad reversible reaction
 Tqi Tri-Quad irreversible reaction
 Mmi Multi-Multi irreversible reaction
 Bmi Bi-Multi irreversible reaction
 Qmi Quad-Multi irreversible reaction
 Tmi Tri-Multi irreversible reaction
 Umi Uni-Multi irreversible reaction
 Mqi Multi-Quad irreversible reaction
 Mti Multi-Tri irreversible reaction
 Mbi Multi-Bi irreversible reaction
 Mui Multi-Uni irreversible reaction
 Mbr Multi-Bi reversible reaction
 Mmr Multi-Multi reversible reaction
 Mqr Multi-Quad reversible reaction
 Mtr Multi-Tri reversible reaction
 Mur Multi-Uni reversible reaction
 Umr Uni-Multi reversible reaction
 Bmr Bi-Multi reversible reaction
 Qmr Quad-Multi reversible reaction
 Tmr Tri-Multi reversible reaction

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