This package contains reaction models. Each reaction is represented
by an arrow, and substances are connected to the arrowheads.
The reactions in this package accept one to three reactants and products,
and some reactions also need an activator/inhibitor/modifier.
Substances are connected to the arrowheads, and activators/inhibitors/modifiers are
connected to the top or bottom of the circle containing a plus, a minus or the letter M.
Reactions can take place between two compartments. If the reaction has more than one substrates or products,
all substrates need to be located in one compartment, and all products also need to be in one compartment.
Name | Description |
---|---|
MassAction | Mass-action kinetics reactions |
MichaelisMenten | Michaelis-Menten kinetics reactions |
Inhibition | Inhibition kinetics reactions |
HyperbolicModifier | Hyperbolic modifier kinetics reactions |
Hill | Hill reactions kinetics |
BiSubstrate | Bi-substrate reactions |
Activation | Activation kinetics reactions |
FastEquilibrium | Base classes for reactions with fast (instant) equilibrium |