This package contains reaction models. Each reaction is
represented by an arrow, and substances are connected to the
arrowheads. The reactions in this package accept one to three
reactants and products, and some reactions also need an
activator/inhibitor/modifier. Substances are connected to the
arrowheads, and activators/inhibitors/modifiers are connected to
the top or bottom of the circle containing a plus, a minus or the
letter M.
Reactions can take place between two compartments. If the reaction
has more than one substrates or products, all substrates need to be
located in one compartment, and all products also need to be in one
compartment.
| Name | Description |
|---|---|
| MassAction | Mass-action kinetics reactions |
| MichaelisMenten | Michaelis-Menten kinetics reactions |
| Inhibition | Inhibition kinetics reactions |
| HyperbolicModifier | Hyperbolic modifier kinetics reactions |
| Hill | Hill reactions kinetics |
| BiSubstrate | Bi-substrate reactions |
| Activation | Activation kinetics reactions |
| FastEquilibrium | Base classes for reactions with fast (instant) equilibrium |